Available data in KPMP
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Main study data
Clinical
Codebook:
Data dictionary:
Clinical data
Controlled
Pathology
Molecular
Data type: Transcriptomics
10X Genomics multiome:
snRNA-seq & snATAC-seq
snRNA-seq & snATAC-seq
Open
Controlled
Controlled
Regional Transcriptomics
Open
Controlled
Single-cell RNA-seq
Open
Controlled
Controlled
Single-nucleus RNA-seq
Open
Controlled
Spatial transcriptomics
Open
Controlled
Data type: Proteomics
Multimodal Imaging Mass Spectrometry
Open
Data not yet generated
Data type: Metabolomics
Spatial metabolomics
Open
Spatial lipidomics
Open
Spatial N-glycomics
Open
Data type: Imaging
Imaging Mass Cytometry
Open
Data not yet generated
Data type: Epigenetics
CUT&RUN
Open
Not available
Controlled
Not available
Controlled
Biomarker
Plasma & urine
Open
Controlled
Ancillary study data
This ancillary study includes participants enrolled outside of the KPMP protocol(s)
Healthy Reference (n=125, study concluded 6-30-2023)
KPMP HRT Site:
Living kidney donors
Living kidney donors
KPMP HRT Site:
Kidney stone donors
Kidney stone donors
KPMP Pilot 1 nephrectomies
KPMP Pilot1v2 Protocol nephrectomies
Protocol:
Available upon request
Available upon request
Not available
Not available
Data category
Clinical
Document/data type
KPMP HRT Site:
Living kidney donors
Living kidney donors
KPMP HRT Site:
Kidney stone donors
Kidney stone donors
KPMP Pilot 1 nephrectomies
KPMP Pilot1v2 Protocol nephrectomies
Data dictionary:
Not available
Not available
Not available
Not available
Clinical data
Open
Pathology
Experimental strategy
KPMP HRT Site:
Living kidney donors
Living kidney donors
KPMP HRT Site:
Kidney stone donors
Kidney stone donors
KPMP Pilot 1 nephrectomies
KPMP Pilot1v2 Protocol nephrectomies
Electron microscopy
Not available
Not available
Not available
Not available
Immunofluorescence
Not available
Not available
Not available
Not available
Molecular
Experimental strategy
KPMP HRT Site:
Living kidney donors
Living kidney donors
KPMP HRT Site:
Kidney stone donors
Kidney stone donors
KPMP Pilot 1 nephrectomies
KPMP Pilot1v2 Protocol nephrectomies
Data type: Transcriptomics
10X Genomics multiome:
snRNA-seq & snATAC-seq
snRNA-seq & snATAC-seq
Open
Data not yet generated
Data not yet generated
Bulk total/mRNA
Open
Not available
Not available
Not available
Not available
Controlled
Not available
Not available
Not available
Not available
Regional Transcriptomics
Open
Not available
Not available
Not available
Single-cell RNA-seq
Open
Not available
Single-nucleus ATAC-seq
Open
Data not yet generated
Data not yet generated
Single-nucleus RNA-seq
Open
Spatial transcriptomics
Open
Data not yet generated
Not available
Data type: Proteomics
Regional proteomics
Open
Not available
Not available
Not available
Data type: Metabolomics
Spatial metabolomics
Open
Not available
Not available
Spatial lipidomics
Open
Not available
Not available
Spatial N-glycomics
Open
Not available
Not available
Data type: Imaging
3D imaging & cytometry
Open
Data not yet generated
Data not yet generated
Not available
Not available
CODEX
Open
Data not yet generated
Data not yet generated
Not available
Not available
Data type: Epigenetics
DNA methyl-seq
Open
Data not yet generated
Data not yet generated
Biomarker
Clinical
Codebook:
Clinical data
Open
Not available
Blood & urine
Retinal imaging substudy (n=22, study concluded 6-30-2022)
Protocol:
Available on request
Data category
Clinical
Codebook:
Clinical data
Open
Not available
Retinal images
fMRI substudy (n=13)
Protocol:
Available on request
Data category
Clinical
Codebook:
Clinical data
Open
Not available
Retinal images
Kidney physiology substudy (n=7)
Protocol:
Available on request
Data category
Clinical
Codebook:
Clinical data
Open
Not available